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A variable looks up a value from the template context. If you want to insert the value of a variable in your template, you can use the following syntax: {{ myVar }}. This looks up for the myVar variable from the context and displays it. Variable names can have dots in them which look up properties, just like in javascript.
Variables available in JMWE
JMWE makes the issue, transition, linkedIssue, parentIssue, now and currentUser variables available to templates. You can access their properties using "." or "[ ]". For example, you can access the current issue key using {{issue.key}}.
issue variable
The issue variable is used to insert data of the issue being transitioned. You can access the issue data by looking up at its properties.
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{{now}} returns the current date and time, e.g. 2016-09-30T13:57:23.608Z
User-defined variables
In addition to the above variables, you can also create your own variables within the template using the set Nunjucks tag.
For example:
{% set x = "High" %} sets the value of the variable x to High. You can also set the variable to an object. For example: {% set assignee = issue.fields.assignee %}
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You might also want to look at Accessing the details of an issue or a transition in Nunjucks to know how to access the details of an issue or a transition.
See here for more templating features available in Nunjucks. You might also want to refer here for use cases with Nunjucks annotations.